This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1kxo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:05, 3 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1kxo.png|left|200px]]
 
-
{{STRUCTURE_1kxo| PDB=1kxo | SCENE= }}
+
==ENGINEERED LIPOCALIN DIGA16 : APO-FORM==
-
 
+
<StructureSection load='1kxo' size='340' side='right'caption='[[1kxo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===ENGINEERED LIPOCALIN DIGA16 : APO-FORM===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1kxo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pieris_brassicae Pieris brassicae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KXO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KXO FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12823976}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kxo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kxo OCA], [https://pdbe.org/1kxo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kxo RCSB], [https://www.ebi.ac.uk/pdbsum/1kxo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kxo ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1kxo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pieris_brassicae Pieris brassicae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KXO OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/BBP_PIEBR BBP_PIEBR] This protein binds the blue pigments bilins.<ref>PMID:3202956</ref>
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:012823976</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Pieris brassicae]]
+
Check<jmol>
-
[[Category: Korndoerfer, I P.]]
+
<jmolCheckbox>
-
[[Category: Skerra, A.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kx/1kxo_consurf.spt"</scriptWhenChecked>
-
[[Category: Anticalin]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Digoxigenin]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Genetical engineering]]
+
</jmolCheckbox>
-
[[Category: Ligand binding protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kxo ConSurf].
-
[[Category: Lipocalin]]
+
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pieris brassicae]]
[[Category: Pieris brassicae]]
 +
[[Category: Korndoerfer IP]]
 +
[[Category: Skerra A]]

Current revision

ENGINEERED LIPOCALIN DIGA16 : APO-FORM

PDB ID 1kxo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1kxo"
Personal tools