This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n1j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:27, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1n1j.png|left|200px]]
 
-
{{STRUCTURE_1n1j| PDB=1n1j | SCENE= }}
+
==Crystal structure of the NF-YB/NF-YC histone pair==
 +
<StructureSection load='1n1j' size='340' side='right'caption='[[1n1j]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1n1j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N1J FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n1j OCA], [https://pdbe.org/1n1j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n1j RCSB], [https://www.ebi.ac.uk/pdbsum/1n1j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n1j ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NFYB_HUMAN NFYB_HUMAN] Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters, for example in type 1 collagen, albumin and beta-actin genes.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n1/1n1j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n1j ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of the NF-YB/NF-YC histone pair===
+
==See Also==
-
 
+
*[[Nuclear transcription factor Y|Nuclear transcription factor Y]]
-
{{ABSTRACT_PUBMED_12401788}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[1n1j]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1J OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:012401788</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Cocchiarella, F.]]
+
[[Category: Large Structures]]
-
[[Category: Mantovani, R.]]
+
[[Category: Cocchiarella F]]
-
[[Category: Moras, D.]]
+
[[Category: Mantovani R]]
-
[[Category: Romier, C.]]
+
[[Category: Moras D]]
-
[[Category: Dna binding protein]]
+
[[Category: Romier C]]
-
[[Category: Histone-like pair]]
+

Current revision

Crystal structure of the NF-YB/NF-YC histone pair

PDB ID 1n1j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools