This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1m5s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:40, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1m5s.png|left|200px]]
 
-
{{STRUCTURE_1m5s| PDB=1m5s | SCENE= }}
+
==Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri==
-
 
+
<StructureSection load='1m5s' size='340' side='right'caption='[[1m5s]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
===Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1m5s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_barkeri Methanosarcina barkeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M5S FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12192072}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m5s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m5s OCA], [https://pdbe.org/1m5s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m5s RCSB], [https://www.ebi.ac.uk/pdbsum/1m5s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m5s ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1m5s]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanosarcina_barkeri Methanosarcina barkeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M5S OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FTR_METBF FTR_METBF] Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR).
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:012192072</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Formylmethanofuran--tetrahydromethanopterin N-formyltransferase]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m5/1m5s_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m5s ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Methanosarcina barkeri]]
[[Category: Methanosarcina barkeri]]
-
[[Category: Ermler, U.]]
+
[[Category: Ermler U]]
-
[[Category: Grimm, C.]]
+
[[Category: Grimm C]]
-
[[Category: Mamat, B.]]
+
[[Category: Mamat B]]
-
[[Category: Roth, A.]]
+
[[Category: Roth A]]
-
[[Category: Schubert, D.]]
+
[[Category: Schubert D]]
-
[[Category: Shima, S.]]
+
[[Category: Shima S]]
-
[[Category: Thauer, R K.]]
+
[[Category: Thauer RK]]
-
[[Category: Tziatzios, C.]]
+
[[Category: Tziatzios C]]
-
[[Category: Alpha/beta sandwich]]
+
-
[[Category: Transferase]]
+

Current revision

Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri

PDB ID 1m5s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools