1lfb
From Proteopedia
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- | [[Image:1lfb.png|left|200px]] | ||
- | + | ==THE X-RAY STRUCTURE OF AN ATYPICAL HOMEODOMAIN PRESENT IN THE RAT LIVER TRANSCRIPTION FACTOR LFB1(SLASH)HNF1 AND IMPLICATIONS FOR DNA BINDING== | |
- | + | <StructureSection load='1lfb' size='340' side='right'caption='[[1lfb]], [[Resolution|resolution]] 2.80Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1lfb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LFB FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lfb OCA], [https://pdbe.org/1lfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lfb RCSB], [https://www.ebi.ac.uk/pdbsum/1lfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lfb ProSAT]</span></td></tr> | |
- | == | + | </table> |
- | [[1lfb]] is a 1 chain structure with sequence from [ | + | == Function == |
- | + | [https://www.uniprot.org/uniprot/HNF1A_RAT HNF1A_RAT] Transcriptional activator that regulates the tissue specific expression of multiple genes, especially in pancreatic islet cells and in liver. Required for the expression of several liver specific genes. Binds to the inverted palindrome 5'-GTTAATNATTAAC-3'. | |
- | == | + | == Evolutionary Conservation == |
- | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lf/1lfb_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lfb ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Rattus norvegicus]] | [[Category: Rattus norvegicus]] | ||
- | [[Category: Ceska | + | [[Category: Ceska TA]] |
- | [[Category: Cortese | + | [[Category: Cortese R]] |
- | [[Category: Lamers | + | [[Category: Lamers M]] |
- | [[Category: Monaci | + | [[Category: Monaci P]] |
- | [[Category: Nicosia | + | [[Category: Nicosia A]] |
- | [[Category: Suck | + | [[Category: Suck D]] |
- | + |
Current revision
THE X-RAY STRUCTURE OF AN ATYPICAL HOMEODOMAIN PRESENT IN THE RAT LIVER TRANSCRIPTION FACTOR LFB1(SLASH)HNF1 AND IMPLICATIONS FOR DNA BINDING
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Categories: Large Structures | Rattus norvegicus | Ceska TA | Cortese R | Lamers M | Monaci P | Nicosia A | Suck D