1m11
From Proteopedia
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- | [[Image:1m11.png|left|200px]] | ||
- | + | ==structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy== | |
+ | <SX load='1m11' size='340' side='right' viewer='molstar' caption='[[1m11]], [[Resolution|resolution]] 16.00Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[1m11]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Echovirus_E7 Echovirus E7] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M11 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 16Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m11 OCA], [https://pdbe.org/1m11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m11 RCSB], [https://www.ebi.ac.uk/pdbsum/1m11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m11 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/DAF_HUMAN DAF_HUMAN] This protein recognizes C4b and C3b fragments that condense with cell-surface hydroxyl or amino groups when nascent C4b and C3b are locally generated during C4 and c3 activation. Interaction of daf with cell-associated C4b and C3b polypeptides interferes with their ability to catalyze the conversion of C2 and factor B to enzymatically active C2a and Bb and thereby prevents the formation of C4b2a and C3bBb, the amplification convertases of the complement cascade.<ref>PMID:7525274</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m1/1m11_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m11 ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | == | + | ==See Also== |
- | + | *[[CD55|CD55]] | |
- | + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |
- | + | == References == | |
- | + | <references/> | |
- | [[ | + | __TOC__ |
- | + | </SX> | |
- | == | + | [[Category: Echovirus E7]] |
- | < | + | |
- | [[Category: Echovirus | + | |
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Baker | + | [[Category: Large Structures]] |
- | [[Category: Bator | + | [[Category: Baker TS]] |
- | [[Category: Chipman | + | [[Category: Bator CM]] |
- | [[Category: He | + | [[Category: Chipman PR]] |
- | [[Category: Kuhn | + | [[Category: He Y]] |
- | [[Category: Lin | + | [[Category: Kuhn RJ]] |
- | [[Category: Medof | + | [[Category: Lin F]] |
- | [[Category: Rossmann | + | [[Category: Medof ME]] |
- | [[Category: Shoham | + | [[Category: Rossmann MG]] |
- | + | [[Category: Shoham M]] | |
- | + | ||
- | + | ||
- | + |
Current revision
structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
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Categories: Echovirus E7 | Homo sapiens | Large Structures | Baker TS | Bator CM | Chipman PR | He Y | Kuhn RJ | Lin F | Medof ME | Rossmann MG | Shoham M