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1orf

From Proteopedia

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[[Image:1orf.png|left|200px]]
 
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{{STRUCTURE_1orf| PDB=1orf | SCENE= }}
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==The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity==
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<StructureSection load='1orf' size='340' side='right'caption='[[1orf]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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===The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1orf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ORF FirstGlance]. <br>
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{{ABSTRACT_PUBMED_12819769}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE'>0G6</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1orf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1orf OCA], [https://pdbe.org/1orf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1orf RCSB], [https://www.ebi.ac.uk/pdbsum/1orf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1orf ProSAT]</span></td></tr>
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[[1orf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORF OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GRAA_HUMAN GRAA_HUMAN] This enzyme is necessary for target cell lysis in cell-mediated immune responses. It cleaves after Lys or Arg. Cleaves APEX1 after 'Lys-31' and destroys its oxidative repair activity. Involved in apoptosis.<ref>PMID:12524539</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/or/1orf_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1orf ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
*[[Granzyme|Granzyme]]
*[[Granzyme|Granzyme]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:012819769</ref><references group="xtra"/>
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__TOC__
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[[Category: Granzyme A]]
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Bell, J K.]]
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[[Category: Large Structures]]
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[[Category: Craik, C S.]]
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[[Category: Bell JK]]
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[[Category: Fletterick, R J.]]
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[[Category: Craik CS]]
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[[Category: Goetz, D H.]]
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[[Category: Fletterick RJ]]
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[[Category: Harris, J L.]]
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[[Category: Goetz DH]]
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[[Category: Mahrus, S.]]
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[[Category: Harris JL]]
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[[Category: Hydrolase-hydrolase inhibitor complex]]
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[[Category: Mahrus S]]

Current revision

The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity

PDB ID 1orf

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