1pix

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:08, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1pix.png|left|200px]]
 
-
{{STRUCTURE_1pix| PDB=1pix | SCENE= }}
+
==Crystal structure of the carboxyltransferase subunit of the bacterial ion pump glutaconyl-coenzyme A decarboxylase==
-
 
+
<StructureSection load='1pix' size='340' side='right'caption='[[1pix]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===Crystal structure of the carboxyltransferase subunit of the bacterial ion pump glutaconyl-coenzyme A decarboxylase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1pix]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidaminococcus_fermentans Acidaminococcus fermentans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PIX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PIX FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12853465}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pix OCA], [https://pdbe.org/1pix PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pix RCSB], [https://www.ebi.ac.uk/pdbsum/1pix PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pix ProSAT]</span></td></tr>
-
[[1pix]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acidaminococcus_fermentans Acidaminococcus fermentans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PIX OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/GCDA_ACIFV GCDA_ACIFV] Decarboxylase subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
-
<ref group="xtra">PMID:012853465</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/1pix_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pix ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Acidaminococcus fermentans]]
[[Category: Acidaminococcus fermentans]]
-
[[Category: Glutaconyl-CoA decarboxylase]]
+
[[Category: Large Structures]]
-
[[Category: Buckel, W.]]
+
[[Category: Buckel W]]
-
[[Category: Huber, R.]]
+
[[Category: Huber R]]
-
[[Category: Jacob, U.]]
+
[[Category: Jacob U]]
-
[[Category: Schall, I.]]
+
[[Category: Schall I]]
-
[[Category: Wendt, K S.]]
+
[[Category: Wendt KS]]
-
[[Category: Biotin-dependent ion pump]]
+
-
[[Category: Carboxyltransferase]]
+
-
[[Category: Decarboxylase]]
+
-
[[Category: Lyase]]
+

Current revision

Crystal structure of the carboxyltransferase subunit of the bacterial ion pump glutaconyl-coenzyme A decarboxylase

PDB ID 1pix

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools