1pue
From Proteopedia
(Difference between revisions)
m (Protected "1pue" [edit=sysop:move=sysop]) |
|||
(8 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
- | [[Image:1pue.png|left|200px]] | ||
- | + | ==PU.1 ETS DOMAIN-DNA COMPLEX== | |
- | + | <StructureSection load='1pue' size='340' side='right'caption='[[1pue]], [[Resolution|resolution]] 2.10Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1pue]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PUE FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pue OCA], [https://pdbe.org/1pue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pue RCSB], [https://www.ebi.ac.uk/pdbsum/1pue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pue ProSAT]</span></td></tr> | |
- | == | + | </table> |
- | [[1pue]] is a 6 chain structure with sequence from [ | + | == Disease == |
- | + | [https://www.uniprot.org/uniprot/SPI1_MOUSE SPI1_MOUSE] Note=Involved in murine acute Friend erythroleukemia. It is a target region for SFFV proviral insertion. | |
- | == | + | == Function == |
- | < | + | [https://www.uniprot.org/uniprot/SPI1_MOUSE SPI1_MOUSE] Binds to the PU-box, a purine-rich DNA sequence (5'-GAGGAA-3') that can act as a lymphoid-specific enhancer. This protein is a transcriptional activator that may be specifically involved in the differentiation or activation of macrophages or B-cells. Also binds RNA and may modulate pre-mRNA splicing.<ref>PMID:8626664</ref> |
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pu/1pue_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pue ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
- | [[Category: Ely | + | [[Category: Synthetic construct]] |
- | [[Category: Klemsz | + | [[Category: Ely KR]] |
- | [[Category: Kodandapani | + | [[Category: Klemsz M]] |
- | [[Category: Maki | + | [[Category: Kodandapani R]] |
- | [[Category: McKercher | + | [[Category: Maki RA]] |
- | [[Category: Ni | + | [[Category: McKercher S]] |
- | [[Category: Piccialli | + | [[Category: Ni CZ]] |
- | [[Category: Pio | + | [[Category: Piccialli G]] |
- | + | [[Category: Pio F]] | |
- | + | ||
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
PU.1 ETS DOMAIN-DNA COMPLEX
|
Categories: Large Structures | Mus musculus | Synthetic construct | Ely KR | Klemsz M | Kodandapani R | Maki RA | McKercher S | Ni CZ | Piccialli G | Pio F