1pw5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:49, 17 October 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1pw5.png|left|200px]]
 
-
{{STRUCTURE_1pw5| PDB=1pw5 | SCENE= }}
+
==putative nagD protein==
-
 
+
<StructureSection load='1pw5' size='340' side='right'caption='[[1pw5]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===putative nagD protein===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1pw5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PW5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PW5 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[1pw5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PW5 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pw5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pw5 OCA], [https://pdbe.org/1pw5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pw5 RCSB], [https://www.ebi.ac.uk/pdbsum/1pw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pw5 ProSAT], [https://www.topsan.org/Proteins/MCSG/1pw5 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9X264_THEMA Q9X264_THEMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/1pw5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pw5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: Cuff, M E.]]
+
[[Category: Cuff ME]]
-
[[Category: Edwards, A.]]
+
[[Category: Edwards A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Skarina T]]
-
[[Category: Skarina, T.]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Nagd protein]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: T. maritima]]
+
-
[[Category: Unknown function]]
+

Current revision

putative nagD protein

PDB ID 1pw5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools