1pjl

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[[Image:1pjl.png|left|200px]]
 
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{{STRUCTURE_1pjl| PDB=1pjl | SCENE= }}
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==Crystal structure of human m-NAD-ME in ternary complex with NAD and Lu3+==
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<StructureSection load='1pjl' size='340' side='right'caption='[[1pjl]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1pjl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PJL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LU:LUTETIUM+(III)+ION'>LU</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pjl OCA], [https://pdbe.org/1pjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pjl RCSB], [https://www.ebi.ac.uk/pdbsum/1pjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pjl ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MAOM_HUMAN MAOM_HUMAN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pj/1pjl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pjl ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The catalytic activity of malic enzyme (ME), a member of a new class of oxidative decarboxylases, requires the presence of divalent cations (Mn(2+), Mg(2+), and others). The crystal structure at 2.9 A resolution of human mitochondrial NAD(+)-dependent malic enzyme in a ternary complex with NAD(+) and the lanthanide ion Lu(3+), which has similar radius as Mn(2+), reveals a new conformation of the enzyme. The active site in this ternary complex is in an open form, while the organization of the tetramer of the enzyme actually resembles that with a closed active site. The Lu(3+) ion is bound to the enzyme at the same site as Mn(2+). Kinetic studies showed that Lu(3+) is a potent inhibitor of both the human NAD(P)(+)-dependent ME and the NADP(+)-dependent ME from pigeon liver, and is competitive with respect to the divalent cation, consistent with the structural information.
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===Crystal structure of human m-NAD-ME in ternary complex with NAD and Lu3+===
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Potent and competitive inhibition of malic enzymes by lanthanide ions.,Yang Z, Batra R, Floyd DL, Hung HC, Chang GG, Tong L Biochem Biophys Res Commun. 2000 Aug 2;274(2):440-4. PMID:10913357<ref>PMID:10913357</ref>
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{{ABSTRACT_PUBMED_10913357}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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==About this Structure==
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<div class="pdbe-citations 1pjl" style="background-color:#fffaf0;"></div>
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[[1pjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PJL OCA].
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== References ==
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<references/>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:010913357</ref><references group="xtra"/>
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Batra, R.]]
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[[Category: Large Structures]]
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[[Category: Chang, G G.]]
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[[Category: Batra R]]
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[[Category: Floyd, D L.]]
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[[Category: Chang G-G]]
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[[Category: Hung, H C.]]
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[[Category: Floyd DL]]
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[[Category: Tong, L.]]
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[[Category: Hung H-C]]
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[[Category: Yang, Z.]]
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[[Category: Tong L]]
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[[Category: Oxidoreductase]]
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[[Category: Yang Z]]

Current revision

Crystal structure of human m-NAD-ME in ternary complex with NAD and Lu3+

PDB ID 1pjl

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