This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4i1k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:48, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4i1k.png|left|200px]]
 
-
{{STRUCTURE_4i1k| PDB=4i1k | SCENE= }}
+
==Crystal Structure of VRN1 (Residues 208-341)==
-
 
+
<StructureSection load='4i1k' size='340' side='right'caption='[[4i1k]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===Crystal Structure of VRN1 (Residues 208-341)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[4i1k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4I1K FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_23255593}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4i1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4i1k OCA], [https://pdbe.org/4i1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4i1k RCSB], [https://www.ebi.ac.uk/pdbsum/4i1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4i1k ProSAT]</span></td></tr>
-
[[4i1k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4I1K OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/VRN1_ARATH VRN1_ARATH] Involved in the regulation of vernalization. Acts as transcriptional repressor of FLC, a major target of the vernalization pathway. Binds DNA in vitro in a non-sequence-specific manner.<ref>PMID:12114624</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Byriel, K.]]
+
[[Category: Large Structures]]
-
[[Category: Chanson, A H.]]
+
[[Category: Byriel K]]
-
[[Category: Hill, J M.]]
+
[[Category: Chanson AH]]
-
[[Category: King, G.]]
+
[[Category: Hill JM]]
-
[[Category: Martin, J L.]]
+
[[Category: King G]]
-
[[Category: McCallum, E J.]]
+
[[Category: Martin JL]]
-
[[Category: Mylne, J S.]]
+
[[Category: McCallum EJ]]
-
[[Category: Ohme-Takagi, M.]]
+
[[Category: Mylne JS]]
-
[[Category: B3 domain beta-barrel]]
+
[[Category: Ohme-Takagi M]]
-
[[Category: Dna binding protein]]
+

Current revision

Crystal Structure of VRN1 (Residues 208-341)

PDB ID 4i1k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools