1tfm

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[[Image:1tfm.gif|left|200px]]<br /><applet load="1tfm" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1tfm, resolution 2.80&Aring;" />
 
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'''CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM'''<br />
 
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==About this Structure==
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==CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM==
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1TFM is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Viscum_album Viscum album] with <scene name='pdbligand=NAG:'>NAG</scene>, <scene name='pdbligand=GAL:'>GAL</scene> and <scene name='pdbligand=P6C:'>P6C</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TFM OCA].
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<StructureSection load='1tfm' size='340' side='right'caption='[[1tfm]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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[[Category: Protein complex]]
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== Structural highlights ==
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[[Category: Viscum album]]
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<table><tr><td colspan='2'>[[1tfm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Viscum_album Viscum album]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TFM FirstGlance]. <br>
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[[Category: Babu, C R.]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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[[Category: Bilgrami, S.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=P6C:2-AMINO-4-ISOPROPYL-PTERIDINE-6-CARBOXYLIC+ACID'>P6C</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene></td></tr>
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[[Category: Kaur, P.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tfm OCA], [https://pdbe.org/1tfm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tfm RCSB], [https://www.ebi.ac.uk/pdbsum/1tfm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tfm ProSAT]</span></td></tr>
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[[Category: Mishra, V.]]
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</table>
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[[Category: Paramasivam, M.]]
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== Function ==
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[[Category: Sharma, R S.]]
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[https://www.uniprot.org/uniprot/ML4_VISAL ML4_VISAL] The A chain is responsible for inhibiting protein synthesis through the catalytic inactivation of 60S ribosomal subunits by removing adenine from position 4,324 of 28S rRNA. The B chain binds to cell receptors and probably facilitates the entry into the cell of the A chain; B chains are also responsible for cell agglutination (lectin activity). Inhibits growth of the human tumor cell line Molt4.<ref>PMID:15001393</ref> <ref>PMID:1450445</ref> [UniProtKB:P81446]
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[[Category: Singh, T P.]]
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== Evolutionary Conservation ==
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[[Category: Srinivasan, A.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Yadav, S.]]
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Check<jmol>
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[[Category: GAL]]
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<jmolCheckbox>
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[[Category: NAG]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tf/1tfm_consurf.spt"</scriptWhenChecked>
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[[Category: P6C]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: beta trefoil]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: protein-inhibitor complex]]
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</jmolCheckbox>
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[[Category: ribosome inactivating protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tfm ConSurf].
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<div style="clear:both"></div>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:13:07 2008''
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==See Also==
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*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Viscum album]]
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[[Category: Babu CR]]
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[[Category: Bilgrami S]]
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[[Category: Kaur P]]
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[[Category: Mishra V]]
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[[Category: Paramasivam M]]
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[[Category: Sharma RS]]
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[[Category: Singh TP]]
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[[Category: Srinivasan A]]
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[[Category: Yadav S]]

Current revision

CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM

PDB ID 1tfm

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