This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sc5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1sc5" [edit=sysop:move=sysop])
Current revision (08:29, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sc5.png|left|200px]]
 
-
{{STRUCTURE_1sc5| PDB=1sc5 | SCENE= }}
+
==Sigma-28(FliA)/FlgM complex==
 +
<StructureSection load='1sc5' size='340' side='right'caption='[[1sc5]], [[Resolution|resolution]] 3.26&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1sc5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SC5 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.26&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sc5 OCA], [https://pdbe.org/1sc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1sc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sc5 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O67268_AQUAE O67268_AQUAE] Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity).[RuleBase:RU000715]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sc/1sc5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sc5 ConSurf].
 +
<div style="clear:both"></div>
-
===Sigma-28(FliA)/FlgM complex===
+
==See Also==
-
 
+
*[[Sigma factor 3D structures|Sigma factor 3D structures]]
-
{{ABSTRACT_PUBMED_15068809}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[1sc5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SC5 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:015068809</ref><references group="xtra"/>
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Darst, S A.]]
+
[[Category: Large Structures]]
-
[[Category: Ray, S S.]]
+
[[Category: Darst SA]]
-
[[Category: Sorenson, M K.]]
+
[[Category: Ray SS]]
-
[[Category: Anti-sigma factor]]
+
[[Category: Sorenson MK]]
-
[[Category: Flagellar gene regulation]]
+
-
[[Category: Rna polymerase sigma factor]]
+
-
[[Category: Transcription]]
+

Current revision

Sigma-28(FliA)/FlgM complex

PDB ID 1sc5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools