1tlb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1tlb" [edit=sysop:move=sysop])
Current revision (08:40, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1tlb.png|left|200px]]
 
-
{{STRUCTURE_1tlb| PDB=1tlb | SCENE= }}
+
==Yeast coproporphyrinogen oxidase==
-
 
+
<StructureSection load='1tlb' size='340' side='right'caption='[[1tlb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===Yeast coproporphyrinogen oxidase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1tlb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TLB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TLB FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15194705}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tlb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tlb OCA], [https://pdbe.org/1tlb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tlb RCSB], [https://www.ebi.ac.uk/pdbsum/1tlb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tlb ProSAT]</span></td></tr>
-
[[1tlb]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TLB OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/HEM6_YEAST HEM6_YEAST] Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (By similarity).
-
<ref group="xtra">PMID:015194705</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Coproporphyrinogen oxidase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tl/1tlb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tlb ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Ferrara, J D.]]
+
[[Category: Ferrara JD]]
-
[[Category: Hill, C P.]]
+
[[Category: Hill CP]]
-
[[Category: Kushner, J P.]]
+
[[Category: Kushner JP]]
-
[[Category: Labbe, P.]]
+
[[Category: Labbe P]]
-
[[Category: Pflugrath, J W.]]
+
[[Category: Pflugrath JW]]
-
[[Category: Phillip, J D.]]
+
[[Category: Phillip JD]]
-
[[Category: Robinson, H.]]
+
[[Category: Robinson H]]
-
[[Category: Warby, C A.]]
+
[[Category: Warby CA]]
-
[[Category: Whitby, F G.]]
+
[[Category: Whitby FG]]
-
[[Category: Yang, C.]]
+
[[Category: Yang C]]
-
[[Category: Coproporphyrinogen oxidase]]
+
-
[[Category: Enzyme]]
+
-
[[Category: Heme biosynthesis]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Yeast coproporphyrinogen oxidase

PDB ID 1tlb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools