1wxr
From Proteopedia
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- | [[Image:1wxr.png|left|200px]] | ||
- | + | ==Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli== | |
- | + | <StructureSection load='1wxr' size='340' side='right'caption='[[1wxr]], [[Resolution|resolution]] 2.20Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1wxr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WXR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WXR FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wxr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wxr OCA], [https://pdbe.org/1wxr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wxr RCSB], [https://www.ebi.ac.uk/pdbsum/1wxr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wxr ProSAT]</span></td></tr> | |
- | == | + | </table> |
- | [[1wxr]] is a 1 chain structure with sequence from [ | + | == Function == |
- | + | [https://www.uniprot.org/uniprot/HBP_ECOLX HBP_ECOLX] Interacts with hemoglobin, degrades it and subsequently binds the released heme. Could make heme accessible not only for E.coli, but also for B.fragilis during mixed intra-abdominal infections. Has a role in abscess formation.<ref>PMID:9743528</ref> <ref>PMID:11748157</ref> | |
- | == | + | == Evolutionary Conservation == |
- | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wx/1wxr_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wxr ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
- | [[Category: Heddle | + | [[Category: Large Structures]] |
- | [[Category: Luirink | + | [[Category: Heddle JG]] |
- | [[Category: Mizutani | + | [[Category: Luirink J]] |
- | [[Category: Otto | + | [[Category: Mizutani K]] |
- | [[Category: Oudega | + | [[Category: Otto BR]] |
- | [[Category: Park | + | [[Category: Oudega B]] |
- | [[Category: Sijbrandi | + | [[Category: Park S-Y]] |
- | [[Category: Tame | + | [[Category: Sijbrandi R]] |
- | + | [[Category: Tame JRH]] | |
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Current revision
Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
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Categories: Escherichia coli | Large Structures | Heddle JG | Luirink J | Mizutani K | Otto BR | Oudega B | Park S-Y | Sijbrandi R | Tame JRH