1xm3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:55, 15 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xm3.png|left|200px]]
 
-
{{STRUCTURE_1xm3| PDB=1xm3 | SCENE= }}
+
==Crystal structure of Northeast Structural Genomics Target SR156==
-
 
+
<StructureSection load='1xm3' size='340' side='right'caption='[[1xm3]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Crystal structure of Northeast Structural Genomics Target SR156===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1xm3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XM3 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[1xm3]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XM3 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xm3 OCA], [https://pdbe.org/1xm3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xm3 RCSB], [https://www.ebi.ac.uk/pdbsum/1xm3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xm3 ProSAT], [https://www.topsan.org/Proteins/NESGC/1xm3 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/THIG_BACSU THIG_BACSU] Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.<ref>PMID:14567704</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xm/1xm3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xm3 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Abashidze, M.]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T.]]
+
[[Category: Abashidze M]]
-
[[Category: Forouhar, F.]]
+
[[Category: Acton T]]
-
[[Category: Hunt, J.]]
+
[[Category: Forouhar F]]
-
[[Category: Kuzin, A.]]
+
[[Category: Hunt J]]
-
[[Category: Ma, L.]]
+
[[Category: Kuzin A]]
-
[[Category: Montelione, G.]]
+
[[Category: Ma L]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione G]]
-
[[Category: Tong, L.]]
+
[[Category: Tong L]]
-
[[Category: Vorobiev, S.]]
+
[[Category: Vorobiev S]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Biosynthetic protein]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of Northeast Structural Genomics Target SR156

PDB ID 1xm3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1xm3"
Personal tools