This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1ts7
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1ts7.png|left|200px]] | ||
| - | + | ==Structure of the pR cis wobble and pR E46Q intermediates from time-resolved Laue crystallography== | |
| - | + | <StructureSection load='1ts7' size='340' side='right'caption='[[1ts7]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1ts7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halorhodospira_halophila Halorhodospira halophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TS7 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HC4:4-HYDROXYCINNAMIC+ACID'>HC4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ts7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ts7 OCA], [https://pdbe.org/1ts7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ts7 RCSB], [https://www.ebi.ac.uk/pdbsum/1ts7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ts7 ProSAT]</span></td></tr> |
| - | [[1ts7]] is a 1 chain structure with sequence from [ | + | </table> |
| - | + | == Function == | |
| - | == | + | [https://www.uniprot.org/uniprot/PYP_HALHA PYP_HALHA] Photoactive blue light protein. Probably functions as a photoreceptor for a negative phototaxis response. |
| - | < | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ts/1ts7_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ts7 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Halorhodospira halophila]] | [[Category: Halorhodospira halophila]] | ||
| - | [[Category: Anderson | + | [[Category: Large Structures]] |
| - | [[Category: Anfinrud | + | [[Category: Anderson S]] |
| - | [[Category: Ihee | + | [[Category: Anfinrud PA]] |
| - | [[Category: Moffat | + | [[Category: Ihee H]] |
| - | [[Category: Pahl | + | [[Category: Moffat K]] |
| - | [[Category: Rajagopal | + | [[Category: Pahl R]] |
| - | [[Category: Schmidt | + | [[Category: Rajagopal S]] |
| - | [[Category: Schotte | + | [[Category: Schmidt M]] |
| - | [[Category: Srajer | + | [[Category: Schotte F]] |
| - | [[Category: Wulff | + | [[Category: Srajer V]] |
| - | + | [[Category: Wulff M]] | |
Current revision
Structure of the pR cis wobble and pR E46Q intermediates from time-resolved Laue crystallography
| |||||||||||
Categories: Halorhodospira halophila | Large Structures | Anderson S | Anfinrud PA | Ihee H | Moffat K | Pahl R | Rajagopal S | Schmidt M | Schotte F | Srajer V | Wulff M
