This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xng

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1xng" [edit=sysop:move=sysop])
Current revision (13:36, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xng.png|left|200px]]
 
-
{{STRUCTURE_1xng| PDB=1xng | SCENE= }}
+
==Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori==
 +
<StructureSection load='1xng' size='340' side='right'caption='[[1xng]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1xng]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XNG FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=DND:NICOTINIC+ACID+ADENINE+DINUCLEOTIDE'>DND</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xng OCA], [https://pdbe.org/1xng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xng RCSB], [https://www.ebi.ac.uk/pdbsum/1xng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xng ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NADE_HELPY NADE_HELPY]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xn/1xng_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xng ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori===
+
==See Also==
-
 
+
*[[NAD synthase|NAD synthase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[1xng]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XNG OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:015645437</ref><references group="xtra"/>
+
-
[[Category: Helicobacter pylori]]
+
-
[[Category: Eom, S H.]]
+
-
[[Category: Im, Y J.]]
+
-
[[Category: Kang, G B.]]
+
-
[[Category: Kim, Y S.]]
+
-
[[Category: Lee, J H.]]
+
-
[[Category: Rho, S H.]]
+
-
[[Category: Amidotransferase]]
+
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
-
[[Category: Ligase]]
+
[[Category: Large Structures]]
-
[[Category: Nh3-dependent nad+ synthetase]]
+
[[Category: Eom SH]]
 +
[[Category: Im YJ]]
 +
[[Category: Kang GB]]
 +
[[Category: Kim YS]]
 +
[[Category: Lee JH]]
 +
[[Category: Rho SH]]

Current revision

Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori

PDB ID 1xng

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools