This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tdt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1tdt" [edit=sysop:move=sysop])
Current revision (08:38, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1tdt.png|left|200px]]
 
-
{{STRUCTURE_1tdt| PDB=1tdt | SCENE= }}
+
==THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE==
-
 
+
<StructureSection load='1tdt' size='340' side='right'caption='[[1tdt]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1tdt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_variant_bovis Mycobacterium tuberculosis variant bovis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TDT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TDT FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_9012664}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tdt OCA], [https://pdbe.org/1tdt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tdt RCSB], [https://www.ebi.ac.uk/pdbsum/1tdt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tdt ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1tdt]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_bovis Mycobacterium bovis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TDT OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/DAPD_UNKP DAPD_UNKP]
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:009012664</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Mycobacterium bovis]]
+
Check<jmol>
-
[[Category: Beaman, T W.]]
+
<jmolCheckbox>
-
[[Category: Binder, D W.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/td/1tdt_consurf.spt"</scriptWhenChecked>
-
[[Category: Blanchard, J S.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Roderick, S L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Cell wall biosynthesis]]
+
</jmolCheckbox>
-
[[Category: Hexapeptide transferase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tdt ConSurf].
-
[[Category: Lysine metabolism]]
+
<div style="clear:both"></div>
-
[[Category: Succinyltransferase]]
+
__TOC__
-
[[Category: Transferase]]
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Mycobacterium tuberculosis variant bovis]]
 +
[[Category: Beaman TW]]
 +
[[Category: Binder DW]]
 +
[[Category: Blanchard JS]]
 +
[[Category: Roderick SL]]

Current revision

THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE

PDB ID 1tdt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools