This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1t0i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1t0i" [edit=sysop:move=sysop])
Current revision (08:35, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1t0i.png|left|200px]]
 
-
{{STRUCTURE_1t0i| PDB=1t0i | SCENE= }}
+
==YLR011wp, a Saccharomyces cerevisiae NA(D)PH-dependent FMN reductase==
-
 
+
<StructureSection load='1t0i' size='340' side='right'caption='[[1t0i]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===YLR011wp, a Saccharomyces cerevisiae NA(D)PH-dependent FMN reductase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1t0i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T0I FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15184374}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t0i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t0i OCA], [https://pdbe.org/1t0i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t0i RCSB], [https://www.ebi.ac.uk/pdbsum/1t0i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t0i ProSAT]</span></td></tr>
-
[[1t0i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T0I OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/LOT6_YEAST LOT6_YEAST] Has several reductase activities that are NAD(P)H-dependent and involve FMN as a cofactor, ferricyanide being the best substrate for reduction. May be involved in ferric iron assimilation.<ref>PMID:15184374</ref>
-
<ref group="xtra">PMID:015184374</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Saccharomyces cerevisiae]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Blondeau, K.]]
+
Check<jmol>
-
[[Category: Graille, M.]]
+
<jmolCheckbox>
-
[[Category: Janin, J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t0/1t0i_consurf.spt"</scriptWhenChecked>
-
[[Category: Leulliot, N.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Liger, D.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Quevillon-Cheruel, S.]]
+
</jmolCheckbox>
-
[[Category: Tilbeurgh, H van.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t0i ConSurf].
-
[[Category: Zhou, C Z.]]
+
<div style="clear:both"></div>
-
[[Category: Azoreductase]]
+
== References ==
-
[[Category: Flavodoxin]]
+
<references/>
-
[[Category: Fmn binding protein]]
+
__TOC__
-
[[Category: Oxidoreductase]]
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
 +
[[Category: Blondeau K]]
 +
[[Category: Graille M]]
 +
[[Category: Janin J]]
 +
[[Category: Leulliot N]]
 +
[[Category: Liger D]]
 +
[[Category: Quevillon-Cheruel S]]
 +
[[Category: Zhou C-Z]]
 +
[[Category: Van Tilbeurgh H]]

Current revision

YLR011wp, a Saccharomyces cerevisiae NA(D)PH-dependent FMN reductase

PDB ID 1t0i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools