1x1n
From Proteopedia
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| - | [[Image:1x1n.png|left|200px]] | ||
| - | + | ==Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato== | |
| - | + | <StructureSection load='1x1n' size='340' side='right'caption='[[1x1n]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1x1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_tuberosum Solanum tuberosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X1N FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| - | [[1x1n]] is a 1 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x1n OCA], [https://pdbe.org/1x1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x1n RCSB], [https://www.ebi.ac.uk/pdbsum/1x1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x1n ProSAT]</span></td></tr> |
| - | [[ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/DPEP_SOLTU DPEP_SOLTU] May act during starch breakdown to convert small oligosaccharides into larger molecules upon which starch phosphorylase can act, or may change the structure of starch molecules and grain architecture by modifying chain length, or may generate from starch and glucose oligosaccharides which can serve either as primers for new starch phosphoenzyme. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x1/1x1n_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x1n ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Solanum tuberosum]] | [[Category: Solanum tuberosum]] | ||
| - | [[Category: Fujii | + | [[Category: Fujii K]] |
| - | [[Category: Imamura | + | [[Category: Imamura K]] |
| - | [[Category: Kusunoki | + | [[Category: Kusunoki M]] |
| - | [[Category: Matsuura | + | [[Category: Matsuura T]] |
| - | [[Category: Nakagawa | + | [[Category: Nakagawa A]] |
| - | [[Category: Nitta | + | [[Category: Nitta Y]] |
| - | [[Category: Takaha | + | [[Category: Takaha T]] |
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Current revision
Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato
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Categories: Large Structures | Solanum tuberosum | Fujii K | Imamura K | Kusunoki M | Matsuura T | Nakagawa A | Nitta Y | Takaha T
