This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yas

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yas" [edit=sysop:move=sysop])
Current revision (08:56, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yas.png|left|200px]]
 
-
{{STRUCTURE_1yas| PDB=1yas | SCENE= }}
+
==HYDROXYNITRILE LYASE COMPLEXED WITH HISTIDINE==
-
 
+
<StructureSection load='1yas' size='340' side='right'caption='[[1yas]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===HYDROXYNITRILE LYASE COMPLEXED WITH HISTIDINE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yas]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hevea_brasiliensis Hevea brasiliensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YAS FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_8805565}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HIS:HISTIDINE'>HIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yas OCA], [https://pdbe.org/1yas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yas RCSB], [https://www.ebi.ac.uk/pdbsum/1yas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yas ProSAT]</span></td></tr>
-
[[1yas]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hevea_brasiliensis Hevea brasiliensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YAS OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/HNL_HEVBR HNL_HEVBR] Involved in cyanogenesis, the release of HCN from injured tissues. Decomposes a varieties of (R) or (S) cyanohydrins into HCN and the corresponding aldehydes and ketones. The natural substrate of this enzyme is (S)-acetone cyanohydrin.
-
<ref group="xtra">PMID:008805565</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ya/1yas_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yas ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Hevea brasiliensis]]
[[Category: Hevea brasiliensis]]
-
[[Category: Hydroxynitrilase]]
+
[[Category: Large Structures]]
-
[[Category: Kratky, C.]]
+
[[Category: Kratky C]]
-
[[Category: Wagner, U G.]]
+
[[Category: Wagner UG]]
-
[[Category: Cyanhydrin formation]]
+
-
[[Category: Cyanogenesis]]
+
-
[[Category: Lyase]]
+
-
[[Category: Oxynitrilase]]
+

Current revision

HYDROXYNITRILE LYASE COMPLEXED WITH HISTIDINE

PDB ID 1yas

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools