1yw4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yw4" [edit=sysop:move=sysop])
Current revision (05:02, 17 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yw4.png|left|200px]]
 
-
{{STRUCTURE_1yw4| PDB=1yw4 | SCENE= }}
+
==Crystal Structure of the Succinylglutamate Desuccinylase from Chromobacterium violaceum, Northeast Structural Genomics Target CvR22.==
-
 
+
<StructureSection load='1yw4' size='340' side='right'caption='[[1yw4]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal Structure of the Succinylglutamate Desuccinylase from Chromobacterium violaceum, Northeast Structural Genomics Target CvR22.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yw4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromobacterium_violaceum_ATCC_12472 Chromobacterium violaceum ATCC 12472]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YW4 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[1yw4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW4 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yw4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw4 OCA], [https://pdbe.org/1yw4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yw4 RCSB], [https://www.ebi.ac.uk/pdbsum/1yw4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw4 ProSAT], [https://www.topsan.org/Proteins/NESGC/1yw4 TOPSAN]</span></td></tr>
-
[[Category: Chromobacterium violaceum]]
+
</table>
-
[[Category: Abashidze, M.]]
+
== Function ==
-
[[Category: Acton, T B.]]
+
[https://www.uniprot.org/uniprot/ASTE_CHRVO ASTE_CHRVO] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).
-
[[Category: Conover, K.]]
+
== Evolutionary Conservation ==
-
[[Category: Forouhar, F.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Hunt, J F.]]
+
Check<jmol>
-
[[Category: Montelione, G T.]]
+
<jmolCheckbox>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw4_consurf.spt"</scriptWhenChecked>
-
[[Category: Tong, L.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Alpha-beta protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hydrolase]]
+
</jmolCheckbox>
-
[[Category: Nesg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yw4 ConSurf].
-
[[Category: Northeast structural genomics consortium]]
+
<div style="clear:both"></div>
-
[[Category: Protein structure initiative]]
+
__TOC__
-
[[Category: Psi]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Chromobacterium violaceum ATCC 12472]]
 +
[[Category: Large Structures]]
 +
[[Category: Abashidze M]]
 +
[[Category: Acton TB]]
 +
[[Category: Conover K]]
 +
[[Category: Forouhar F]]
 +
[[Category: Hunt JF]]
 +
[[Category: Montelione GT]]
 +
[[Category: Tong L]]

Current revision

Crystal Structure of the Succinylglutamate Desuccinylase from Chromobacterium violaceum, Northeast Structural Genomics Target CvR22.

PDB ID 1yw4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools