1z4h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:31, 6 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z4h.png|left|200px]]
 
-
{{STRUCTURE_1z4h| PDB=1z4h | SCENE= }}
+
==The response regulator TorI belongs to a new family of atypical excisionase==
 +
<StructureSection load='1z4h' size='340' side='right'caption='[[1z4h]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1z4h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z4H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z4H FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z4h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z4h OCA], [https://pdbe.org/1z4h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z4h RCSB], [https://www.ebi.ac.uk/pdbsum/1z4h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z4h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TORI_ECOLI TORI_ECOLI] Transcription inhibitory protein for the torCAD operon. Also acts as an excisionase and plays an essential role in the defective prophage CPS53 excision.<ref>PMID:15197250</ref> <ref>PMID:16079126</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
TorI (Tor inhibition protein) has been identified in Escherichia coli as a protein inhibitor acting through protein-protein interaction with the TorR response regulator. This interaction, which does not interfere with TorR DNA binding activity, probably prevents the recruitment of RNA polymerase to the torC promoter. In this study we have solved the solution structure of TorI, which adopts a prokaryotic winged-helix arrangement. Despite no primary sequence similarity, the three-dimensional structure of TorI is highly homologous to the (lambda)Xis, Mu bacteriophage repressor (MuR-DBD), and transposase (MuA-DBD) structures. We propose that the TorI protein is the structural missing link between the (lambda)Xis and MuR proteins. Moreover, in vivo assays demonstrated that TorI plays an essential role in prophage excision. Heteronuclear NMR experiments and site-directed mutagenesis studies have pinpointed out key residues involved in the DNA binding activity of TorI. Our findings suggest that TorI-related proteins identified in various pathogenic bacterial genomes define a new family of atypical excisionases.
-
===The response regulator TorI belongs to a new family of atypical excisionase===
+
Structural and genetic analyses reveal a key role in prophage excision for the TorI response regulator inhibitor.,Elantak L, Ansaldi M, Guerlesquin F, Mejean V, Morelli X J Biol Chem. 2005 Nov 4;280(44):36802-8. Epub 2005 Aug 2. PMID:16079126<ref>PMID:16079126</ref>
-
{{ABSTRACT_PUBMED_16079126}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1z4h" style="background-color:#fffaf0;"></div>
-
[[1z4h]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z4H OCA].
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Ansaldi, M.]]
+
[[Category: Large Structures]]
-
[[Category: Elantak, L.]]
+
[[Category: Ansaldi M]]
-
[[Category: Guerlesquin, F.]]
+
[[Category: Elantak L]]
-
[[Category: Mejean, V.]]
+
[[Category: Guerlesquin F]]
-
[[Category: Morelli, X.]]
+
[[Category: Mejean V]]
-
[[Category: Dna binding protein]]
+
[[Category: Morelli X]]
-
[[Category: Protein binding]]
+
-
[[Category: Reverse turn]]
+
-
[[Category: Winged helix]]
+

Current revision

The response regulator TorI belongs to a new family of atypical excisionase

PDB ID 1z4h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools