1yre

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yre" [edit=sysop:move=sysop])
Current revision (08:59, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yre.png|left|200px]]
 
-
{{STRUCTURE_1yre| PDB=1yre | SCENE= }}
+
==Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA==
-
 
+
<StructureSection load='1yre' size='340' side='right'caption='[[1yre]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-
===Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yre]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YRE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YRE FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
-
[[1yre]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YRE OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yre FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yre OCA], [https://pdbe.org/1yre PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yre RCSB], [https://www.ebi.ac.uk/pdbsum/1yre PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yre ProSAT], [https://www.topsan.org/Proteins/MCSG/1yre TOPSAN]</span></td></tr>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
</table>
-
[[Category: Edwards, A M.]]
+
== Function ==
-
[[Category: Joachimiak, A.]]
+
[https://www.uniprot.org/uniprot/Q9HYX1_PSEAE Q9HYX1_PSEAE]
-
[[Category: Lunin, V V.]]
+
== Evolutionary Conservation ==
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Osipiuk, J.]]
+
Check<jmol>
-
[[Category: Savchenko, A.]]
+
<jmolCheckbox>
-
[[Category: Apc5563]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/1yre_consurf.spt"</scriptWhenChecked>
-
[[Category: Mcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Midwest center for structural genomic]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Mscg]]
+
</jmolCheckbox>
-
[[Category: Pa3270]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yre ConSurf].
-
[[Category: Protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: Psi]]
+
__TOC__
-
[[Category: Structural genomic]]
+
</StructureSection>
-
[[Category: Unknown function]]
+
[[Category: Large Structures]]
 +
[[Category: Pseudomonas aeruginosa PAO1]]
 +
[[Category: Edwards AM]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Lunin VV]]
 +
[[Category: Osipiuk J]]
 +
[[Category: Savchenko A]]

Current revision

Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA

PDB ID 1yre

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools