This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cxx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2cxx" [edit=sysop:move=sysop])
Current revision (11:32, 22 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cxx.png|left|200px]]
 
-
{{STRUCTURE_2cxx| PDB=2cxx | SCENE= }}
+
==Crystal structure of a probable GTP-binding protein engB==
-
 
+
<StructureSection load='2cxx' size='340' side='right'caption='[[2cxx]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===Crystal structure of a probable GTP-binding protein engB===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2cxx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CXX FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[2cxx]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CXX OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cxx OCA], [https://pdbe.org/2cxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cxx RCSB], [https://www.ebi.ac.uk/pdbsum/2cxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cxx ProSAT], [https://www.topsan.org/Proteins/RSGI/2cxx TOPSAN]</span></td></tr>
-
[[Category: Pyrococcus horikoshii]]
+
</table>
-
[[Category: Kukimoto-Niino, M.]]
+
== Function ==
-
[[Category: Murayama, K.]]
+
[https://www.uniprot.org/uniprot/ENGB_PYRHO ENGB_PYRHO] Necessary for normal cell division and for the maintenance of normal septation (By similarity).
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
== Evolutionary Conservation ==
-
[[Category: Shirouzu, M.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Yokoyama, S.]]
+
Check<jmol>
-
[[Category: Cell cycle]]
+
<jmolCheckbox>
-
[[Category: Gtp-binding protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cx/2cxx_consurf.spt"</scriptWhenChecked>
-
[[Category: National project on protein structural and functional analyse]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Nppsfa]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Riken structural genomics/proteomics initiative]]
+
</jmolCheckbox>
-
[[Category: Rsgi]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cxx ConSurf].
-
[[Category: Structural genomic]]
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Kukimoto-Niino M]]
 +
[[Category: Murayama K]]
 +
[[Category: Shirouzu M]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal structure of a probable GTP-binding protein engB

PDB ID 2cxx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools