This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2d3w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:46, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2d3w.png|left|200px]]
 
-
{{STRUCTURE_2d3w| PDB=2d3w | SCENE= }}
+
==Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery==
-
 
+
<StructureSection load='2d3w' size='340' side='right'caption='[[2d3w]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
===Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2d3w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D3W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D3W FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_16364320}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d3w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d3w OCA], [https://pdbe.org/2d3w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d3w RCSB], [https://www.ebi.ac.uk/pdbsum/2d3w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d3w ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2d3w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D3W OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/SUFC_ECOLI SUFC_ECOLI] Has low ATPase activity. The SufBCD complex acts synergistically with SufE to stimulate the cysteine desulfurase activity of SufS. The SufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake from extracellular iron chelators under iron limitation.<ref>PMID:12554644</ref> <ref>PMID:12941942</ref>
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:016364320</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/2d3w_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d3w ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Fukuyama, K.]]
+
[[Category: Large Structures]]
-
[[Category: Hasegawa, Y.]]
+
[[Category: Fukuyama K]]
-
[[Category: Kitaoka, S.]]
+
[[Category: Hasegawa Y]]
-
[[Category: Minami, Y.]]
+
[[Category: Kitaoka S]]
-
[[Category: Takahashi, Y.]]
+
[[Category: Minami Y]]
-
[[Category: Wada, K.]]
+
[[Category: Takahashi Y]]
-
[[Category: Abc-atpase]]
+
[[Category: Wada K]]
-
[[Category: Abc-transporter]]
+
-
[[Category: Biosynthetic protein]]
+
-
[[Category: Iron-sulfur cluster]]
+
-
[[Category: Sufc]]
+

Current revision

Crystal Structure of Escherichia coli SufC, an ATPase compenent of the SUF iron-sulfur cluster assembly machinery

PDB ID 2d3w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools