This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2edv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:49, 29 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2edv.png|left|200px]]
 
-
{{STRUCTURE_2edv| PDB=2edv | SCENE= }}
+
==Solution structure of the PDZ domain from human FERM and PDZ domain containing 1==
-
 
+
<StructureSection load='2edv' size='340' side='right'caption='[[2edv]]' scene=''>
-
===Solution structure of the PDZ domain from human FERM and PDZ domain containing 1===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2edv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EDV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EDV FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2edv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2edv OCA], [https://pdbe.org/2edv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2edv RCSB], [https://www.ebi.ac.uk/pdbsum/2edv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2edv ProSAT], [https://www.topsan.org/Proteins/RSGI/2edv TOPSAN]</span></td></tr>
-
[[2edv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EDV OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FRPD1_HUMAN FRPD1_HUMAN] Stabilizes membrane-bound GPSM1, and thereby promotes its interaction with GNAI1.<ref>PMID:18566450</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/2edv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2edv ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Hayashi, F.]]
+
[[Category: Large Structures]]
-
[[Category: Kurosaki, C.]]
+
[[Category: Hayashi F]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Kurosaki C]]
-
[[Category: Seimiya, K.]]
+
[[Category: Seimiya K]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yoshida, M.]]
+
[[Category: Yoshida M]]
-
[[Category: Cytoskeletal-associated protein]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Solution structure of the PDZ domain from human FERM and PDZ domain containing 1

PDB ID 2edv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools