1v53
From Proteopedia
(Difference between revisions)
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1v53.gif|left|200px]]<br /><applet load="1v53" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1v53, resolution 2.85Å" /> | ||
| - | '''The crystal structure of 3-isopropylmalate dehydrogenase from Bacillus coagulans'''<br /> | ||
| - | == | + | ==The crystal structure of 3-isopropylmalate dehydrogenase from Bacillus coagulans== |
| - | + | <StructureSection load='1v53' size='340' side='right'caption='[[1v53]], [[Resolution|resolution]] 2.85Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1v53]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Weizmannia_coagulans Weizmannia coagulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V53 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V53 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v53 OCA], [https://pdbe.org/1v53 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v53 RCSB], [https://www.ebi.ac.uk/pdbsum/1v53 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v53 ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/LEU3_WEICA LEU3_WEICA] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v53_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v53 ConSurf]. |
| - | [ | + | <div style="clear:both"></div> |
| - | + | ==See Also== | |
| + | *[[Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Weizmannia coagulans]] | ||
| + | [[Category: Fujita K]] | ||
| + | [[Category: Minami H]] | ||
| + | [[Category: Mizui R]] | ||
| + | [[Category: Nakamura S]] | ||
| + | [[Category: Sekiguchi T]] | ||
| + | [[Category: Suzuki K]] | ||
| + | [[Category: Takenaka A]] | ||
| + | [[Category: Tsunoda M]] | ||
| + | [[Category: Tsuzaki S]] | ||
Current revision
The crystal structure of 3-isopropylmalate dehydrogenase from Bacillus coagulans
| |||||||||||
Categories: Large Structures | Weizmannia coagulans | Fujita K | Minami H | Mizui R | Nakamura S | Sekiguchi T | Suzuki K | Takenaka A | Tsunoda M | Tsuzaki S

