2cz8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:21, 25 October 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cz8.png|left|200px]]
 
-
{{STRUCTURE_2cz8| PDB=2cz8 | SCENE= }}
+
==Crystal Structure of tt0972 protein from Thermus thermophilus==
-
 
+
<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
===Crystal Structure of tt0972 protein from Thermus thermophilus===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [https://pdbe.org/2cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
-
[[Category: Thermus thermophilus]]
+
</table>
-
[[Category: Inagaki, E.]]
+
== Function ==
-
[[Category: Kumei, M.]]
+
[https://www.uniprot.org/uniprot/DODEC_THET8 DODEC_THET8] May function as storage protein that sequesters various flavins and other cofactors, thereby protecting the cell against undesirable reactions mediated by the free cofactors. Binds and sequesters FMN, FAD, lumiflavin and lumichrome, and can also bind coenzyme A.<ref>PMID:17855371</ref>
-
[[Category: Nakano, N.]]
+
== Evolutionary Conservation ==
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Shinkai, A.]]
+
Check<jmol>
-
[[Category: Yokoyama, S.]]
+
<jmolCheckbox>
-
[[Category: Dodecamer]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz8_consurf.spt"</scriptWhenChecked>
-
[[Category: Flavin]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Flavin-adenine dinucleotide]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: National project on protein structural and functional analyse]]
+
</jmolCheckbox>
-
[[Category: Nppsfa]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz8 ConSurf].
-
[[Category: Riken structural genomics/proteomics initiative]]
+
<div style="clear:both"></div>
-
[[Category: Rsgi]]
+
== References ==
-
[[Category: Structural genomic]]
+
<references/>
-
[[Category: Unknown function]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermus thermophilus HB8]]
 +
[[Category: Inagaki E]]
 +
[[Category: Kumei M]]
 +
[[Category: Nakano N]]
 +
[[Category: Shinkai A]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal Structure of tt0972 protein from Thermus thermophilus

PDB ID 2cz8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools