1vdm
From Proteopedia
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| - | [[Image:1vdm.gif|left|200px]]<br /><applet load="1vdm" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vdm, resolution 2.50Å" /> | ||
| - | '''Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3'''<br /> | ||
| - | == | + | ==Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3== |
| - | + | <StructureSection load='1vdm' size='340' side='right'caption='[[1vdm]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1vdm]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDM FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdm OCA], [https://pdbe.org/1vdm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdm RCSB], [https://www.ebi.ac.uk/pdbsum/1vdm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdm ProSAT], [https://www.topsan.org/Proteins/RSGI/1vdm TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | [[ | + | [https://www.uniprot.org/uniprot/O57827_PYRHO O57827_PYRHO] |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdm_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vdm ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pyrococcus horikoshii]] | ||
| + | [[Category: Kunishima N]] | ||
| + | [[Category: Sugahara M]] | ||
Current revision
Crystal structure of purine phosphoribosyltransferase from Pyrococcus horikoshii Ot3
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