2afm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2afm" [edit=sysop:move=sysop])
Current revision (13:40, 13 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2afm.png|left|200px]]
 
-
{{STRUCTURE_2afm| PDB=2afm | SCENE= }}
+
==Crystal structure of human glutaminyl cyclase at pH 6.5==
 +
<StructureSection load='2afm' size='340' side='right'caption='[[2afm]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2afm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AFM FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2afm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2afm OCA], [https://pdbe.org/2afm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2afm RCSB], [https://www.ebi.ac.uk/pdbsum/2afm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2afm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/QPCT_HUMAN QPCT_HUMAN] Responsible for the biosynthesis of pyroglutamyl peptides. Has a bias against acidic and tryptophan residues adjacent to the N-terminal glutaminyl residue and a lack of importance of chain length after the second residue. Also catalyzes N-terminal pyroglutamate formation. In vitro, catalyzes pyroglutamate formation of N-terminally truncated form of APP amyloid-beta peptides [Glu-3]-beta-amyloid. May be involved in the N-terminal pyroglutamate formation of several amyloid-related plaque-forming peptides.<ref>PMID:15063747</ref> <ref>PMID:18486145</ref> <ref>PMID:21288892</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/af/2afm_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2afm ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of human glutaminyl cyclase at pH 6.5===
+
==See Also==
-
 
+
*[[Glutaminyl cyclase|Glutaminyl cyclase]]
-
{{ABSTRACT_PUBMED_16135565}}
+
== References ==
-
 
+
<references/>
-
==About this Structure==
+
__TOC__
-
[[2afm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AFM OCA].
+
</StructureSection>
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:016135565</ref><references group="xtra"/>
+
-
[[Category: Glutaminyl-peptide cyclotransferase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Cheng, W J.]]
+
[[Category: Large Structures]]
-
[[Category: Huang, K F.]]
+
[[Category: Cheng WJ]]
-
[[Category: Ko, T P.]]
+
[[Category: Huang KF]]
-
[[Category: Liu, Y L.]]
+
[[Category: Ko TP]]
-
[[Category: Wang, A H.J.]]
+
[[Category: Liu YL]]
-
[[Category: Alpha-beta protein]]
+
[[Category: Wang AHJ]]
-
[[Category: Metalloprotein]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of human glutaminyl cyclase at pH 6.5

PDB ID 2afm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools