2dog
From Proteopedia
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| - | [[Image:2dog.png|left|200px]] | ||
| - | + | ==Solution structure of the N-terminal domain of RimM from Thermus thermophilus HB8== | |
| - | + | <StructureSection load='2dog' size='340' side='right'caption='[[2dog]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2dog]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DOG FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dog OCA], [https://pdbe.org/2dog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dog RCSB], [https://www.ebi.ac.uk/pdbsum/2dog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dog ProSAT], [https://www.topsan.org/Proteins/RSGI/2dog TOPSAN]</span></td></tr> | |
| - | == | + | </table> |
| - | [[2dog]] is a 1 chain structure with sequence from [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/RIMM_THET8 RIMM_THET8] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity). | |
| - | == | + | == Evolutionary Conservation == |
| - | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/2dog_consurf.spt"</scriptWhenChecked> | |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dog ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Thermus thermophilus HB8]] |
| - | [[Category: | + | [[Category: Kaminishi T]] |
| - | [[Category: | + | [[Category: Kawazoe M]] |
| - | [[Category: | + | [[Category: Matsumoto E]] |
| - | [[Category: | + | [[Category: Muto Y]] |
| - | [[Category: | + | [[Category: Shirouzu M]] |
| - | [[Category: | + | [[Category: Suzuki S]] |
| + | [[Category: Takemoto C]] | ||
| + | [[Category: Tatsuguchi A]] | ||
| + | [[Category: Yokoyama S]] | ||
Current revision
Solution structure of the N-terminal domain of RimM from Thermus thermophilus HB8
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