This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2hjs
From Proteopedia
(Difference between revisions)
m (Protected "2hjs" [edit=sysop:move=sysop]) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2hjs.png|left|200px]] | ||
| - | + | ==The structure of a probable aspartate-semialdehyde dehydrogenase from Pseudomonas aeruginosa== | |
| - | + | <StructureSection load='2hjs' size='340' side='right'caption='[[2hjs]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2hjs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HJS FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[2hjs]] is a 1 chain structure with sequence from [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">usg ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hjs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hjs OCA], [https://pdbe.org/2hjs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hjs RCSB], [https://www.ebi.ac.uk/pdbsum/2hjs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hjs ProSAT], [https://www.topsan.org/Proteins/MCSG/2hjs TOPSAN]</span></td></tr> |
| - | [[Category: Cuff, M E | + | </table> |
| - | [[Category: Edwards, A | + | == Evolutionary Conservation == |
| - | [[Category: Evdokimova, E | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Joachimiak, A | + | Check<jmol> |
| - | [[Category: Kudritska, M | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/2hjs_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Savchenko, A | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hjs ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pseae]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Evdokimova, E]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kudritska, M]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Savchenko, A]] | ||
[[Category: Aspartate-semialdehyde dehydrogenase]] | [[Category: Aspartate-semialdehyde dehydrogenase]] | ||
[[Category: Probable hydrolase]] | [[Category: Probable hydrolase]] | ||
| - | [[Category: Protein structure initiative]] | + | [[Category: PSI, Protein structure initiative]] |
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
| - | [[Category: Psi]] | ||
| - | [[Category: Structural genomic]] | ||
| - | [[Category: Structurual genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
The structure of a probable aspartate-semialdehyde dehydrogenase from Pseudomonas aeruginosa
| |||||||||||

