2nqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2nqx" [edit=sysop:move=sysop])
Current revision (01:14, 21 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2nqx.png|left|200px]]
 
-
{{STRUCTURE_2nqx| PDB=2nqx | SCENE= }}
+
==Crystal Structure of bovine lactoperoxidase with iodide ions at 2.9A resolution==
 +
<StructureSection load='2nqx' size='340' side='right'caption='[[2nqx]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2nqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NQX FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OSM:1-(OXIDOSULFANYL)METHANAMINE'>OSM</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nqx OCA], [https://pdbe.org/2nqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nqx RCSB], [https://www.ebi.ac.uk/pdbsum/2nqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nqx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PERL_BOVIN PERL_BOVIN] LPO is an antimicrobial agent. It is thought to help protect the udder from infection and promote growth in newborn calves.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/2nqx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nqx ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of bovine lactoperoxidase with iodide ions at 2.9A resolution===
+
==See Also==
-
 
+
*[[Lactoperoxidase|Lactoperoxidase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[2nqx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NQX OCA].
+
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Peroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Bhushan, A.]]
+
[[Category: Bhushan A]]
-
[[Category: Kaur, P.]]
+
[[Category: Kaur P]]
-
[[Category: Sharma, S.]]
+
[[Category: Sharma S]]
-
[[Category: Singh, A K.]]
+
[[Category: Singh AK]]
-
[[Category: Singh, N.]]
+
[[Category: Singh N]]
-
[[Category: Singh, T P.]]
+
[[Category: Singh TP]]
-
[[Category: Complex]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Iodide ion]]
+
-
[[Category: Lactoperoxidase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Crystal Structure of bovine lactoperoxidase with iodide ions at 2.9A resolution

PDB ID 2nqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools