2kym

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2kym" [edit=sysop:move=sysop])
Current revision (06:50, 1 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kym.png|left|200px]]
 
-
{{STRUCTURE_2kym| PDB=2kym | SCENE= }}
+
==Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide==
-
 
+
<StructureSection load='2kym' size='340' side='right'caption='[[2kym]]' scene=''>
-
===Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kym]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lodderomyces_elongisporus_NRRL_YB-4239 Lodderomyces elongisporus NRRL YB-4239] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KYM FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kym OCA], [https://pdbe.org/2kym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kym RCSB], [https://www.ebi.ac.uk/pdbsum/2kym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kym ProSAT]</span></td></tr>
-
[[2kym]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lodderomyces_elongisporus Lodderomyces elongisporus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA].
+
</table>
-
[[Category: Lodderomyces elongisporus]]
+
== Function ==
-
[[Category: Davidson, A R.]]
+
[https://www.uniprot.org/uniprot/A5E3P5_LODEL A5E3P5_LODEL]
-
[[Category: Gorelik, M.]]
+
== Evolutionary Conservation ==
-
[[Category: Muhandiram, R.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Bem1p]]
+
Check<jmol>
-
[[Category: Cdc42p-interacting]]
+
<jmolCheckbox>
-
[[Category: Scaffold]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/2kym_consurf.spt"</scriptWhenChecked>
-
[[Category: Sh3 domain]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Sh3-ci]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Signaling protein]]
+
</jmolCheckbox>
-
[[Category: Ste20p prr]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kym ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Lodderomyces elongisporus NRRL YB-4239]]
 +
[[Category: Saccharomyces cerevisiae]]
 +
[[Category: Davidson AR]]
 +
[[Category: Gorelik M]]
 +
[[Category: Muhandiram R]]

Current revision

Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide

PDB ID 2kym

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools