2pk8
From Proteopedia
(Difference between revisions)
m (Protected "2pk8" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2pk8.png|left|200px]] | ||
| - | + | ==Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus== | |
| - | + | <StructureSection load='2pk8' size='340' side='right'caption='[[2pk8]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2pk8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1she 1she]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PK8 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AUC:GOLD+(I)+CYANIDE+ION'>AUC</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk8 OCA], [https://pdbe.org/2pk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pk8 RCSB], [https://www.ebi.ac.uk/pdbsum/2pk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk8 ProSAT]</span></td></tr> |
| - | [[2pk8]] is a 1 chain structure with sequence from [ | + | </table> |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q8U2E0_PYRFU Q8U2E0_PYRFU] | |
| - | < | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk8_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[ | + | </jmolCheckbox> |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pk8 ConSurf]. |
| - | [[ | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Pyrococcus furiosus DSM 3638]] |
| - | [[Category: | + | [[Category: Adams MWW]] |
| - | [[Category: | + | [[Category: Chen L]] |
| - | [[Category: | + | [[Category: Clancy-Kelley LL]] |
| - | [[Category: | + | [[Category: Dillard BD]] |
| - | [[Category: | + | [[Category: Izumi M]] |
| - | [[Category: | + | [[Category: Jenny Jr FE]] |
| - | [[Category: | + | [[Category: Lee D]] |
| - | [[Category: | + | [[Category: Lee HS]] |
| - | [[Category: | + | [[Category: Liu ZJ]] |
| - | [[Category: | + | [[Category: Poole III FL]] |
| - | [[Category: | + | [[Category: Richardson DC]] |
| - | [[Category: | + | [[Category: Richardson JS]] |
| - | [[Category: | + | [[Category: Rose JP]] |
| - | [[Category: | + | [[Category: Shah A]] |
| - | [[Category: | + | [[Category: Shah C]] |
| - | [[Category: | + | [[Category: Sugar FJ]] |
| + | [[Category: Tempel W]] | ||
| + | [[Category: Wang B-C]] | ||
Current revision
Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus
| |||||||||||
Categories: Large Structures | Pyrococcus furiosus DSM 3638 | Adams MWW | Chen L | Clancy-Kelley LL | Dillard BD | Izumi M | Jenny Jr FE | Lee D | Lee HS | Liu ZJ | Poole III FL | Richardson DC | Richardson JS | Rose JP | Shah A | Shah C | Sugar FJ | Tempel W | Wang B-C

