2k5p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2k5p" [edit=sysop:move=sysop])
Current revision (09:45, 9 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2k5p.png|left|200px]]
 
-
{{STRUCTURE_2k5p| PDB=2k5p | SCENE= }}
+
==NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137==
-
 
+
<StructureSection load='2k5p' size='340' side='right'caption='[[2k5p]]' scene=''>
-
===NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2k5p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_metallireducens_GS-15 Geobacter metallireducens GS-15]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5P FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5p OCA], [https://pdbe.org/2k5p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5p RCSB], [https://www.ebi.ac.uk/pdbsum/2k5p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5p ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5p TOPSAN]</span></td></tr>
-
[[2k5p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_metallireducens_gs-15 Geobacter metallireducens gs-15]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5P OCA].
+
</table>
-
[[Category: Geobacter metallireducens gs-15]]
+
== Function ==
-
[[Category: Acton, T B.]]
+
[https://www.uniprot.org/uniprot/Q39VC5_GEOMG Q39VC5_GEOMG]
-
[[Category: Baran, M C.]]
+
== Evolutionary Conservation ==
-
[[Category: Gurla, S V.T.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Jiang, M.]]
+
Check<jmol>
-
[[Category: Magliaqui, M.]]
+
<jmolCheckbox>
-
[[Category: Mani, R.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5p_consurf.spt"</scriptWhenChecked>
-
[[Category: Montelione, G T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Nair, R.]]
+
</jmolCheckbox>
-
[[Category: Rost, B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5p ConSurf].
-
[[Category: Wang, H.]]
+
<div style="clear:both"></div>
-
[[Category: Xiao, R.]]
+
__TOC__
-
[[Category: Biosynthetic protein]]
+
</StructureSection>
-
[[Category: Geobacter metallireducen]]
+
[[Category: Geobacter metallireducens GS-15]]
-
[[Category: Gmr137]]
+
[[Category: Large Structures]]
-
[[Category: Nesg]]
+
[[Category: Acton TB]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Baran MC]]
-
[[Category: Protein structure initiative]]
+
[[Category: Gurla SVT]]
-
[[Category: Psi-2]]
+
[[Category: Jiang M]]
-
[[Category: Structural genomic]]
+
[[Category: Magliaqui M]]
-
[[Category: Thiamine biosynthesis]]
+
[[Category: Mani R]]
 +
[[Category: Montelione GT]]
 +
[[Category: Nair R]]
 +
[[Category: Rost B]]
 +
[[Category: Wang H]]
 +
[[Category: Xiao R]]

Current revision

NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137

PDB ID 2k5p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools