This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kcq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2kcq" [edit=sysop:move=sysop])
Current revision (09:46, 9 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kcq.png|left|200px]]
 
-
{{STRUCTURE_2kcq| PDB=2kcq | SCENE= }}
+
==Solution structure of protein SRU_2040 from Salinibacter ruber (strain DSM 13855) . Northeast Structural Genomics Consortium target SrR106==
-
 
+
<StructureSection load='2kcq' size='340' side='right'caption='[[2kcq]]' scene=''>
-
===Solution structure of protein SRU_2040 from Salinibacter ruber (strain DSM 13855) . Northeast Structural Genomics Consortium target SrR106===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kcq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salinibacter_ruber_DSM_13855 Salinibacter ruber DSM 13855]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCQ FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kcq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kcq OCA], [https://pdbe.org/2kcq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kcq RCSB], [https://www.ebi.ac.uk/pdbsum/2kcq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kcq ProSAT], [https://www.topsan.org/Proteins/NESGC/2kcq TOPSAN]</span></td></tr>
-
[[2kcq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salinibacter_ruber_dsm_13855 Salinibacter ruber dsm 13855]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCQ OCA].
+
</table>
-
[[Category: Salinibacter ruber dsm 13855]]
+
== Function ==
-
[[Category: Acton, T B.]]
+
[https://www.uniprot.org/uniprot/Q2S0Y5_SALRD Q2S0Y5_SALRD]
-
[[Category: Eletsky, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Everett, J K.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Foote, E L.]]
+
Check<jmol>
-
[[Category: Hua, J.]]
+
<jmolCheckbox>
-
[[Category: Jiang, M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kcq_consurf.spt"</scriptWhenChecked>
-
[[Category: Montelione, G T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Nair, R.]]
+
</jmolCheckbox>
-
[[Category: Rost, B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kcq ConSurf].
-
[[Category: Sukumaran, D.]]
+
<div style="clear:both"></div>
-
[[Category: Swapna, G.]]
+
__TOC__
-
[[Category: Szyperski, T.]]
+
</StructureSection>
-
[[Category: Wu, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Xiao, R.]]
+
[[Category: Salinibacter ruber DSM 13855]]
-
[[Category: Zhao, L.]]
+
[[Category: Acton TB]]
-
[[Category: Nesg]]
+
[[Category: Eletsky A]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Everett JK]]
-
[[Category: Nucleotide-binding protein]]
+
[[Category: Foote EL]]
-
[[Category: Protein structure initiative]]
+
[[Category: Hua J]]
-
[[Category: Psi-2]]
+
[[Category: Jiang M]]
-
[[Category: Structural genomic]]
+
[[Category: Montelione GT]]
-
[[Category: Unknown function]]
+
[[Category: Nair R]]
 +
[[Category: Rost B]]
 +
[[Category: Sukumaran D]]
 +
[[Category: Swapna G]]
 +
[[Category: Szyperski T]]
 +
[[Category: Wu Y]]
 +
[[Category: Xiao R]]
 +
[[Category: Zhao L]]

Current revision

Solution structure of protein SRU_2040 from Salinibacter ruber (strain DSM 13855) . Northeast Structural Genomics Consortium target SrR106

PDB ID 2kcq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kcq"
Personal tools