This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2hqe
From Proteopedia
(Difference between revisions)
m (Protected "2hqe" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2hqe.png|left|200px]] | ||
| - | + | ==Crystal structure of human P100 Tudor domain: Large fragment== | |
| - | + | <StructureSection load='2hqe' size='340' side='right'caption='[[2hqe]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2hqe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HQE FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hqe OCA], [https://pdbe.org/2hqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hqe RCSB], [https://www.ebi.ac.uk/pdbsum/2hqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hqe ProSAT], [https://www.topsan.org/Proteins/SECSG/2hqe TOPSAN]</span></td></tr> |
| - | [[2hqe]] is a 2 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SND1_HUMAN SND1_HUMAN] Functions as a bridging factor between STAT6 and the basal transcription factor. Plays a role in PIM1 regulation of MYB activity. Functions as a transcriptional coactivator for the Epstein-Barr virus nuclear antigen 2 (EBNA2).<ref>PMID:7651391</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/2hqe_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hqe ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Cheng C]] |
| - | [[Category: | + | [[Category: Liu ZJ]] |
| - | [[Category: Shah | + | [[Category: Shah N]] |
| - | [[Category: Silvennoinen | + | [[Category: Silvennoinen O]] |
| - | [[Category: Wang | + | [[Category: Wang BC]] |
| - | [[Category: Xu | + | [[Category: Xu H]] |
| - | [[Category: Yang | + | [[Category: Yang J]] |
| - | [[Category: Zhao | + | [[Category: Zhao M]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of human P100 Tudor domain: Large fragment
| |||||||||||
Categories: Homo sapiens | Large Structures | Cheng C | Liu ZJ | Shah N | Silvennoinen O | Wang BC | Xu H | Yang J | Zhao M

