This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2io8
From Proteopedia
(Difference between revisions)
m (Protected "2io8" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2io8.png|left|200px]] | ||
| - | + | ==E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and ADP== | |
| - | + | <StructureSection load='2io8' size='340' side='right'caption='[[2io8]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2io8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IO8 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2io8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2io8 OCA], [https://pdbe.org/2io8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2io8 RCSB], [https://www.ebi.ac.uk/pdbsum/2io8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2io8 ProSAT]</span></td></tr> |
| - | [[2io8]] is a 2 chain structure with sequence from [ | + | </table> |
| - | + | == Function == | |
| - | == | + | [https://www.uniprot.org/uniprot/GSP_ECOLI GSP_ECOLI] Catalyzes the formation of an amide bond between glutathione and spermidine coupled with hydrolysis of ATP; also catalyzes the hydrolysis of glutathionylspermidine to glutathione and spermidine. |
| - | < | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/2io8_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2io8 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: Chiang | + | [[Category: Large Structures]] |
| - | [[Category: Chong | + | [[Category: Chiang BY]] |
| - | [[Category: Chou | + | [[Category: Chong CM]] |
| - | [[Category: Coward | + | [[Category: Chou CC]] |
| - | [[Category: Ko | + | [[Category: Coward JK]] |
| - | [[Category: Lin | + | [[Category: Ko TP]] |
| - | [[Category: Pai | + | [[Category: Lin CH]] |
| - | [[Category: Wang | + | [[Category: Pai CH]] |
| - | [[Category: Yen | + | [[Category: Wang AH-J]] |
| - | + | [[Category: Yen FJ]] | |
| - | + | ||
| - | + | ||
Current revision
E. coli Bifunctional glutathionylspermidine synthetase/amidase Incomplex with Mg2+ and ADP
| |||||||||||
Categories: Escherichia coli | Large Structures | Chiang BY | Chong CM | Chou CC | Coward JK | Ko TP | Lin CH | Pai CH | Wang AH-J | Yen FJ

