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2kmm

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[[Image:2kmm.png|left|200px]]
 
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{{STRUCTURE_2kmm| PDB=2kmm | SCENE= }}
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==Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)==
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<StructureSection load='2kmm' size='340' side='right'caption='[[2kmm]]' scene=''>
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===Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2kmm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KMM FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kmm OCA], [https://pdbe.org/2kmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kmm RCSB], [https://www.ebi.ac.uk/pdbsum/2kmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kmm ProSAT]</span></td></tr>
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[[2kmm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMM OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7MAV5_PORGI Q7MAV5_PORGI] In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity).[RuleBase:RU003847]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/2kmm_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kmm ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Porphyromonas gingivalis]]
[[Category: Porphyromonas gingivalis]]
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[[Category: Acton, T B.]]
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[[Category: Acton TB]]
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[[Category: Ciccosanti, C.]]
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[[Category: Ciccosanti C]]
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[[Category: Cort, J R.]]
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[[Category: Cort JR]]
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[[Category: Everett, J K.]]
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[[Category: Everett JK]]
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[[Category: Hamilton, K.]]
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[[Category: Hamilton K]]
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[[Category: Kennedy, M A.]]
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[[Category: Kennedy MA]]
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[[Category: Lee, D.]]
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[[Category: Lee D]]
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[[Category: Montelione, G T.]]
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[[Category: Montelione GT]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Nair R]]
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[[Category: Nair, R.]]
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[[Category: Ramelot TA]]
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[[Category: Ramelot, T A.]]
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[[Category: Rost B]]
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[[Category: Rost, B.]]
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[[Category: Swapna G]]
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[[Category: Swapna, G.]]
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[[Category: Xiao R]]
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[[Category: Xiao, R.]]
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[[Category: Yang Y]]
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[[Category: Yang, Y.]]
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[[Category: Hydrolase]]
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[[Category: Methods development]]
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[[Category: Nesg]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: Porphyromonas gingivali]]
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[[Category: Predominantly beta-sheet structure]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Tgs domain]]
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Current revision

Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)

PDB ID 2kmm

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