2ohd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2ohd" [edit=sysop:move=sysop])
Current revision (08:57, 25 October 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ohd.png|left|200px]]
 
-
{{STRUCTURE_2ohd| PDB=2ohd | SCENE= }}
+
==Crystal structure of hypothetical molybdenum cofactor biosynthesis protein C from Sulfolobus tokodaii==
 +
<StructureSection load='2ohd' size='340' side='right'caption='[[2ohd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2ohd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OHD FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ohd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ohd OCA], [https://pdbe.org/2ohd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ohd RCSB], [https://www.ebi.ac.uk/pdbsum/2ohd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ohd ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MOAC_SULTO MOAC_SULTO] Together with MoaA, is involved in the conversion of 5'-GTP to cyclic pyranopterin monophosphate (cPMP or molybdopterin precursor Z) (By similarity).[HAMAP-Rule:MF_01224]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oh/2ohd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ohd ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The crystal structure of a putative molybdenum-cofactor (Moco) biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472) was determined at 2.2 A resolution. The crystal belongs to the monoclinic space group C2, with unit-cell parameters a = 123.31, b = 78.58, c = 112.67 A, beta = 118.1 degrees . The structure was solved by molecular replacement using the structure of Escherichia coli MoaC as the probe model. The asymmetric unit is composed of a hexamer arranged as a trimer of dimers with noncrystallographic 32 symmetry. The structure of ST0472 is very similar to that of E. coli MoaC; however, in the ST0472 protein an additional loop formed by the insertion of seven residues participates in intermonomer interactions and the new structure also reveals the formation of an interdimer beta-sheet. These features may contribute to the stability of the oligomeric state.
-
===Crystal structure of hypothetical molybdenum cofactor biosynthesis protein C from Sulfolobus tokodaii===
+
Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472).,Yoshida H, Yamada M, Kuramitsu S, Kamitori S Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Jul 1;64(Pt, 7):589-92. Epub 2008 Jun 11. PMID:18607082<ref>PMID:18607082</ref>
-
{{ABSTRACT_PUBMED_18607082}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 2ohd" style="background-color:#fffaf0;"></div>
-
[[2ohd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OHD OCA].
+
== References ==
-
 
+
<references/>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:018607082</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Sulfolobus tokodaii str. 7]]
+
[[Category: Large Structures]]
-
[[Category: Kamitori, S.]]
+
[[Category: Sulfurisphaera tokodaii str. 7]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Kamitori S]]
-
[[Category: Yamada, M.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Yoshida, H.]]
+
[[Category: Yamada M]]
-
[[Category: Alpha + beta]]
+
[[Category: Yoshida H]]
-
[[Category: Biosynthetic protein]]
+

Current revision

Crystal structure of hypothetical molybdenum cofactor biosynthesis protein C from Sulfolobus tokodaii

PDB ID 2ohd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ohd"
Personal tools