2jp7
From Proteopedia
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| - | [[Image:2jp7.png|left|200px]]  | ||
| - | + | ==NMR structure of the Mex67 UBA domain==  | |
| + | <StructureSection load='2jp7' size='340' side='right'caption='[[2jp7]]' scene=''>  | ||
| + | == Structural highlights ==  | ||
| + | <table><tr><td colspan='2'>[[2jp7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JP7 FirstGlance]. <br>  | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>  | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jp7 OCA], [https://pdbe.org/2jp7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jp7 RCSB], [https://www.ebi.ac.uk/pdbsum/2jp7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jp7 ProSAT]</span></td></tr>  | ||
| + | </table>  | ||
| + | == Function ==  | ||
| + | [https://www.uniprot.org/uniprot/MEX67_YEAST MEX67_YEAST] Involved in the export of mRNA from the nucleus to the cytoplasm.<ref>PMID:9214641</ref>   | ||
| + | == Evolutionary Conservation ==  | ||
| + | [[Image:Consurf_key_small.gif|200px|right]]  | ||
| + | Check<jmol>  | ||
| + |   <jmolCheckbox>  | ||
| + |     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jp/2jp7_consurf.spt"</scriptWhenChecked>  | ||
| + |     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>  | ||
| + |     <text>to colour the structure by Evolutionary Conservation</text>  | ||
| + |   </jmolCheckbox>  | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jp7 ConSurf].  | ||
| + | <div style="clear:both"></div>  | ||
| + | <div style="background-color:#fffaf0;">  | ||
| + | == Publication Abstract from PubMed ==  | ||
| + | The ubiquitin-associated (UBA) domain of the mRNA nuclear export receptor Mex67 helps in coordinating transcription elongation and nuclear export by interacting both with ubiquitin conjugates and specific targets, such as Hpr1, a component of the THO complex. Here, we analyzed substrate specificity and ubiquitin selectivity of the Mex67 UBA domain. UBA-Mex67 is formed by three helices arranged in a classical UBA fold plus a fourth helix, H4. Deletion or mutation of helix H4 strengthens the interaction between UBA-Mex67 and ubiquitin, but it decreases its affinity for Hpr1. Interaction with Hpr1 is required for Mex67 UBA domain to bind polyubiquitin, possibly by inducing an H4-dependent conformational change. In vivo, deletion of helix H4 reduces cotranscriptional recruitment of Mex67 on activated genes, and it also shows an mRNA export defect. Based on these results, we propose that H4 functions as a molecular switch that coordinates the interaction of Mex67 with ubiquitin bound to specific substrates, defines the selectivity of the Mex67 UBA domain for polyubiquitin, and prevents its binding to nonspecific substrates.  | ||
| - | + | Coordination of Hpr1 and ubiquitin binding by the UBA domain of the mRNA export factor Mex67.,Hobeika M, Brockmann C, Iglesias N, Gwizdek C, Neuhaus D, Stutz F, Stewart M, Divita G, Dargemont C Mol Biol Cell. 2007 Jul;18(7):2561-8. Epub 2007 May 2. PMID:17475778<ref>PMID:17475778</ref>  | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>  | |
| - | + | </div>  | |
| - | + | <div class="pdbe-citations 2jp7" style="background-color:#fffaf0;"></div>  | |
| - | + | == References ==  | |
| - | + | <references/>  | |
| - | ==  | + | __TOC__  | 
| - | <  | + | </StructureSection>  | 
| + | [[Category: Large Structures]]  | ||
[[Category: Saccharomyces cerevisiae]]  | [[Category: Saccharomyces cerevisiae]]  | ||
| - | [[Category: Brockmann  | + | [[Category: Brockmann C]]  | 
| - | [[Category: Dargemont  | + | [[Category: Dargemont C]]  | 
| - | [[Category: Divita  | + | [[Category: Divita G]]  | 
| - | [[Category: Gwizdek  | + | [[Category: Gwizdek C]]  | 
| - | [[Category: Hobeika  | + | [[Category: Hobeika M]]  | 
| - | [[Category: Iglesias  | + | [[Category: Iglesias N]]  | 
| - | [[Category: Neuhaus  | + | [[Category: Neuhaus D]]  | 
| - | [[Category: Stewart  | + | [[Category: Stewart M]]  | 
| - | [[Category: Stutz  | + | [[Category: Stutz F]]  | 
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR structure of the Mex67 UBA domain
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