This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fs5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:25, 14 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fs5.png|left|200px]]
 
-
{{STRUCTURE_2fs5| PDB=2fs5 | SCENE= }}
+
==Crystal structure of TDP-fucosamine acetyltransferase (WecD)- apo form==
-
 
+
<StructureSection load='2fs5' size='340' side='right'caption='[[2fs5]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
===Crystal structure of TDP-fucosamine acetyltransferase (WecD)- apo form===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2fs5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_CFT073 Escherichia coli CFT073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FS5 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_16855251}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fs5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fs5 OCA], [https://pdbe.org/2fs5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fs5 RCSB], [https://www.ebi.ac.uk/pdbsum/2fs5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fs5 ProSAT]</span></td></tr>
-
[[2fs5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_cft073 Escherichia coli cft073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS5 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/WECD_ECOL6 WECD_ECOL6] Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino-4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA).[HAMAP-Rule:MF_02027]<ref>PMID:16855251</ref>
-
<ref group="xtra">PMID:016855251</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Escherichia coli cft073]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative.]]
+
Check<jmol>
-
[[Category: Cygler, M.]]
+
<jmolCheckbox>
-
[[Category: Hung, M N.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fs/2fs5_consurf.spt"</scriptWhenChecked>
-
[[Category: Matte, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Munger, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Nadeau, G.]]
+
</jmolCheckbox>
-
[[Category: Rangarajan, E.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fs5 ConSurf].
-
[[Category: Sulea, T.]]
+
<div style="clear:both"></div>
-
[[Category: Acetyltransferase]]
+
== References ==
-
[[Category: Bsgi]]
+
<references/>
-
[[Category: Gnat fold]]
+
__TOC__
-
[[Category: Montreal-kingston bacterial structural genomics initiative]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Escherichia coli CFT073]]
-
[[Category: Transferase]]
+
[[Category: Large Structures]]
 +
[[Category: Cygler M]]
 +
[[Category: Hung MN]]
 +
[[Category: Matte A]]
 +
[[Category: Munger C]]
 +
[[Category: Nadeau G]]
 +
[[Category: Rangarajan E]]
 +
[[Category: Sulea T]]

Current revision

Crystal structure of TDP-fucosamine acetyltransferase (WecD)- apo form

PDB ID 2fs5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools