2fn3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:24, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fn3.png|left|200px]]
 
-
{{STRUCTURE_2fn3| PDB=2fn3 | SCENE= }}
+
==High resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate==
-
 
+
<StructureSection load='2fn3' size='340' side='right'caption='[[2fn3]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
-
===High resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2fn3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FN3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FN3 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TZD:2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL+TRIHYDROGEN+DIPHOSPHATE'>TZD</scene></td></tr>
-
[[2fn3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FN3 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fn3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fn3 OCA], [https://pdbe.org/2fn3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fn3 RCSB], [https://www.ebi.ac.uk/pdbsum/2fn3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fn3 ProSAT]</span></td></tr>
-
[[Category: Benzoylformate decarboxylase]]
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MDLC_PSEPU MDLC_PSEPU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/2fn3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fn3 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Bera, A K.]]
+
[[Category: Bera AK]]
-
[[Category: Hasson, M S.]]
+
[[Category: Hasson MS]]
-
[[Category: Carbon-carbon]]
+
-
[[Category: Decarboxylase]]
+
-
[[Category: High resolution]]
+
-
[[Category: Lyase]]
+
-
[[Category: Mandelate catabolism]]
+
-
[[Category: Thiamine thiazolone diphosphate]]
+

Current revision

High resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate

PDB ID 2fn3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools