2ppq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2ppq" [edit=sysop:move=sysop])
Current revision (01:19, 21 November 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ppq.png|left|200px]]
 
-
{{STRUCTURE_2ppq| PDB=2ppq | SCENE= }}
+
==Crystal structure of the homoserine kinase from Agrobacterium tumefaciens==
-
 
+
<StructureSection load='2ppq' size='340' side='right'caption='[[2ppq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of the homoserine kinase from Agrobacterium tumefaciens===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ppq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PPQ FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[2ppq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPQ OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ppq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ppq OCA], [https://pdbe.org/2ppq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ppq RCSB], [https://www.ebi.ac.uk/pdbsum/2ppq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ppq ProSAT], [https://www.topsan.org/Proteins/MCSG/2ppq TOPSAN]</span></td></tr>
-
[[Category: Agrobacterium tumefaciens str. c58]]
+
</table>
-
[[Category: Homoserine kinase]]
+
== Evolutionary Conservation ==
-
[[Category: Edwards, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Joachimiak, A.]]
+
Check<jmol>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<jmolCheckbox>
-
[[Category: Savchenko, A.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/2ppq_consurf.spt"</scriptWhenChecked>
-
[[Category: Xu, X.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Zhang, R.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Zheng, H.]]
+
</jmolCheckbox>
-
[[Category: Homoserine kinase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ppq ConSurf].
-
[[Category: Mcsg]]
+
<div style="clear:both"></div>
-
[[Category: Midwest center for structural genomic]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Transferase]]
+
[[Category: Edwards A]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Savchenko A]]
 +
[[Category: Xu X]]
 +
[[Category: Zhang R]]
 +
[[Category: Zheng H]]

Current revision

Crystal structure of the homoserine kinase from Agrobacterium tumefaciens

PDB ID 2ppq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools