2kd7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2kd7" [edit=sysop:move=sysop])
Current revision (09:37, 22 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kd7.png|left|200px]]
 
-
{{STRUCTURE_2kd7| PDB=2kd7 | SCENE= }}
+
==Solution NMR structure of F5/8 type C-terminal domain of a putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR324B==
-
 
+
<StructureSection load='2kd7' size='340' side='right'caption='[[2kd7]]' scene=''>
-
===Solution NMR structure of F5/8 type C-terminal domain of a putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR324B===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KD7 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kd7 OCA], [https://pdbe.org/2kd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kd7 RCSB], [https://www.ebi.ac.uk/pdbsum/2kd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kd7 ProSAT], [https://www.topsan.org/Proteins/NESGC/2kd7 TOPSAN]</span></td></tr>
-
[[2kd7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KD7 OCA].
+
</table>
-
[[Category: Bacteroides thetaiotaomicron vpi-5482]]
+
== Function ==
-
[[Category: Acton, T B.]]
+
[https://www.uniprot.org/uniprot/Q8A9F0_BACTN Q8A9F0_BACTN]
-
[[Category: Ciccosanti, C.]]
+
== Evolutionary Conservation ==
-
[[Category: Eletsky, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Everett, J K.]]
+
Check<jmol>
-
[[Category: Jiang, M.]]
+
<jmolCheckbox>
-
[[Category: Lee, D.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kd/2kd7_consurf.spt"</scriptWhenChecked>
-
[[Category: Lee, H.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Mills, J L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Montelione, G T.]]
+
</jmolCheckbox>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kd7 ConSurf].
-
[[Category: Nair, R.]]
+
<div style="clear:both"></div>
-
[[Category: Prestegard, J H.]]
+
__TOC__
-
[[Category: Rost, B.]]
+
</StructureSection>
-
[[Category: Swapna, G V.T.]]
+
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
-
[[Category: Szyperski, T.]]
+
[[Category: Large Structures]]
-
[[Category: Xiao, R.]]
+
[[Category: Acton TB]]
-
[[Category: Beta-sandwich]]
+
[[Category: Ciccosanti C]]
-
[[Category: Cell adhesion]]
+
[[Category: Eletsky A]]
-
[[Category: F5/8 type c-domain]]
+
[[Category: Everett JK]]
-
[[Category: Nesg]]
+
[[Category: Jiang M]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Lee D]]
-
[[Category: Protein structure initiative]]
+
[[Category: Lee H]]
-
[[Category: Psi-2]]
+
[[Category: Mills JL]]
 +
[[Category: Montelione GT]]
 +
[[Category: Nair R]]
 +
[[Category: Prestegard JH]]
 +
[[Category: Rost B]]
 +
[[Category: Swapna GVT]]
 +
[[Category: Szyperski T]]
 +
[[Category: Xiao R]]

Current revision

Solution NMR structure of F5/8 type C-terminal domain of a putative chitobiase from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR324B

PDB ID 2kd7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools