This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jyn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:07, 29 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jyn.png|left|200px]]
 
-
{{STRUCTURE_2jyn| PDB=2jyn | SCENE= }}
+
==A novel solution NMR structure of protein yst0336 from Saccharomyces cerevisiae. Northeast Structural Genomics Consortium target YT51/Ontario Centre for Structural Proteomics target yst0336==
-
 
+
<StructureSection load='2jyn' size='340' side='right'caption='[[2jyn]]' scene=''>
-
===A novel solution NMR structure of protein yst0336 from Saccharomyces cerevisiae. Northeast Structural Genomics Consortium target YT51/Ontario Centre for Structural Proteomics target yst0336===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2jyn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JYN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JYN FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jyn OCA], [https://pdbe.org/2jyn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jyn RCSB], [https://www.ebi.ac.uk/pdbsum/2jyn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jyn ProSAT], [https://www.topsan.org/Proteins/NESGC/2jyn TOPSAN]</span></td></tr>
-
[[2jyn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JYN OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YP225_YEAST YP225_YEAST]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/2jyn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jyn ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Fares, C.]]
+
[[Category: Fares C]]
-
[[Category: Gutmanas, A.]]
+
[[Category: Gutmanas A]]
-
[[Category: Lemak, A.]]
+
[[Category: Lemak A]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Semest A]]
-
[[Category: OCSP, Ontario Centre for Structural Proteomics.]]
+
[[Category: Wu B]]
-
[[Category: Semest, A.]]
+
[[Category: Yee A]]
-
[[Category: Wu, B.]]
+
-
[[Category: Yee, A.]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Novel fold]]
+
-
[[Category: Ocsp]]
+
-
[[Category: Ontario centre for structural proteomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
[[Category: Yst0336]]
+
-
[[Category: Yt51]]
+

Current revision

A novel solution NMR structure of protein yst0336 from Saccharomyces cerevisiae. Northeast Structural Genomics Consortium target YT51/Ontario Centre for Structural Proteomics target yst0336

PDB ID 2jyn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools