2hg9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2hg9" [edit=sysop:move=sysop])
Current revision (09:32, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hg9.png|left|200px]]
 
-
{{STRUCTURE_2hg9| PDB=2hg9 | SCENE= }}
+
==Reaction centre from Rhodobacter sphaeroides strain R-26.1 complexed with tetrabrominated phosphatidylcholine==
-
 
+
<StructureSection load='2hg9' size='340' side='right'caption='[[2hg9]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
===Reaction centre from Rhodobacter sphaeroides strain R-26.1 complexed with tetrabrominated phosphatidylcholine===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2hg9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HG9 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_17315985}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=PC7:(7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM+4-OXIDE'>PC7</scene>, <scene name='pdbligand=PCK:(7R,18S,19R)-18,19-DIBROMO-7-{[(9S,10S)-9,10-DIBROMOOCTADECANOYL]OXY}-4-HYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM+4-OXIDE'>PCK</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hg9 OCA], [https://pdbe.org/2hg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hg9 RCSB], [https://www.ebi.ac.uk/pdbsum/2hg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hg9 ProSAT]</span></td></tr>
-
[[2hg9]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HG9 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/RCEL_CERSP RCEL_CERSP] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
-
<ref group="xtra">PMID:017315985</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Rhodobacter sphaeroides]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Cogdell, R J.]]
+
Check<jmol>
-
[[Category: Gardiner, A T.]]
+
<jmolCheckbox>
-
[[Category: Isaacs, N W.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hg/2hg9_consurf.spt"</scriptWhenChecked>
-
[[Category: Roszak, A W.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Brominated lipid]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Lipid binding site]]
+
</jmolCheckbox>
-
[[Category: Membrane protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hg9 ConSurf].
-
[[Category: Photosynthesis]]
+
<div style="clear:both"></div>
-
[[Category: Photosynthesis-membrane protein complex]]
+
__TOC__
-
[[Category: Photosynthetic reaction center]]
+
</StructureSection>
 +
[[Category: Cereibacter sphaeroides]]
 +
[[Category: Large Structures]]
 +
[[Category: Cogdell RJ]]
 +
[[Category: Gardiner AT]]
 +
[[Category: Isaacs NW]]
 +
[[Category: Roszak AW]]

Current revision

Reaction centre from Rhodobacter sphaeroides strain R-26.1 complexed with tetrabrominated phosphatidylcholine

PDB ID 2hg9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hg9"
Personal tools